My YJ has full width 60s with the original 4banger and AX5. I've had no trouble with this combo except a sincere lack of power and a max on road speed of 60 mph or so with 5.38 gears and super heavy creepy crawlers on steel beadlocks. I think 60s are an excellent idea if rockcrawling is in your future. Cheaper in the long run to not break than break, fix, replace, break, fix, replace.
If an engine swap is in the future, then go with 60s now. With the economy down i noticed Ford 60s are more and more affordable. Up to 1991 they had kingpins and high pinion. If you swap the dana 44 and upgrade later you will pay much more in the long run, especially to build the dana 44 to handle hard trails.
I don't see a problem with dana 60s on 35 inch tires if a guy is breaking his 44 a lot. But really, who runs 33s on tons unless they are wheeling their tow rig?
A 4banger can break stuff though, so you never know. My pal shawn spun the tubes on his 14bolt with a 4banger auto heh heh sorry pal